Mitogenomic Analysis and Phylogenetic Implications for the Deltocephaline Tribe Chiasmini (Hemiptera: Cicadellidae: Deltocephalinae).

The grassland leafhopper tribe Chiasmini (Cicadellidae: Deltocephalinae) presently comprises 324 described species worldwide, with the highest species diversity occurring in the Nearctic region but a greater diversity of genera occurring in the Old World. In China, this tribe comprises 39 described species in 11 genera, but the fauna remains understudied. The complete mitogenomes of three species of this tribe have been sequenced previously. In order to better understand the phylogenetic position of Chiasmini within the subfamily Deltocephalinae and to investigate relationships among Chiasmini genera and species, we sequenced and analyzed the complete mitogenomes of 13 species belonging to seven genera from China. Comparison of the newly sequenced mitogenomes reveals a closed circular double-stranded structure containing 37 genes with a total length of 14,805 to 16,269 bp and a variable number of non-coding A + T-rich regions. The gene size, gene order, gene arrangement, base composition, codon usage, and secondary structure of tRNAs of the newly sequenced mitogenomes of these 13 species are highly conserved in Chiasmini. The ATN codon is commonly used as the start codon in protein-coding genes (PCGs), except for ND5 in Doratura sp. and ATP6 in Nephotettix nigropictus, which use the rare GTG start codon. Most protein-coding genes have TAA or TAG as the stop codon, but some genes have an incomplete T stop codon. Except for the tRNA for serine (trnS1(AGN)), the secondary structure of the other 21 tRNAs is a typical cloverleaf structure. In addition to the primary type of G-U mismatch, five other types of tRNA mismatches were observed: A-A, A-C, A-G, U-C, and U-U. Chiasmini mitochondrial genomes exhibit gene overlaps with three relatively stable regions: the overlapping sequence between trnW and trnC is AAGTCTTA, the overlapping sequence between ATP8 and ATP6 is generally ATGATTA, and the overlapping sequence between ND4 and ND4L is generally TTATCAT. The largest non-coding region is the control region, which exhibits significant length and compositional variation among species. Some Chiasmini have tandem repeat structures within their control regions. Unlike some other deltocephaline leafhoppers, the sequenced Chiasmini lack mitochondrial gene rearrangements. Phylogenetic analyses of different combinations of protein-coding and ribosomal genes using maximum likelihood and Bayesian methods under different models, using either amino acid or nucleotide sequences, are generally consistent and also agree with results of prior analyses of nuclear and partial mitochondrial gene sequence data, indicating that complete mitochondrial genomes are phylogenetically informative at different levels of divergence within Chiasmini and among leafhoppers in general. Apart from Athysanini and Opsiini, most of the deltocephaline tribes are recovered as monophyletic. The results of ML and BI analyses show that Chiasmini is a monophyletic group with seven monophyletic genera arranged as follows: ((Zahniserius + (Gurawa + (Doratura + Aconurella))) + (Leofa + (Exitianus + Nephotettix))).

Comparative mitochondrial genome analysis of three leafhopper species of the genus Abrus Dai & Zhang (Hemiptera: Cicadellidae: Deltocephalinae) from China with phylogenetic implication.

BACKGROUND: The phylogenetic position and classification of Athysanini are poorly defined, as it includes a large group of polyphyletic genera that have historically been assigned to it mainly because they still exhibit the most typical deltocephaline genitalic and external body characters but lack the distinctive characteristics that other tribes possess. The bamboo-feeding leafhopper genus Abrus belong to the tribe Athysanini of subfamily Deltocephalinae, which currently comprises 19 valid described species, and are limited to the Oriental and Palaearctic regions in China. Although the taxonomy of Abrus are well updated, the references on comparative mitogenomic analyses of Abrus species are only known for a single species. In this study, we sequenced and analyzed the complete mitochondrial genomes (mitogenomes) of Abrus daozhenensis Chen, Yang & Li, 2012 (16,391bp) and A. yunshanensis Chen, Yang & Li, 2012 (15,768bp) (Athysanini), and compared with published mitogenome sequence of A. expansivus Xing & Li, 2014 (15,904bp). RESULTS: These Abrus species shared highly conserved mitogenomes with similar gene order to that of the putative ancestral insect with 37 typical genes and a non-coding A + T-rich region. The nucleotide composition of these genomes is highly biased toward A + T nucleotides (76.2%, 76.3%, and 74.7%), AT-skews (0.091 to 0.095, and 0.095), negative GC-skews (- 0.138, - 0.161, and - 0.138), and codon usage. All 22 tRNA genes had typical cloverleaf secondary structures, except for trnS1 (AGN) which lacks the dihydrouridine arm, and distinctively trnG in the mitogenome of A. expansivus lacks the TψC arm. Phylogenetic analyses based on 13 PCGs, 2 rRNA genes, and 22 tRNA genes consistently recovered the monophyletic Opsiini, Penthimiini, Selenocephalini, Scaphoideini, and Athysanini (except Watanabella graminea, previously sequenced species as Chlorotettix nigromaculatus) based on limited available mitogenome sequence data of 37 species. CONCLUSION: At present, Abrus belongs to the tribe Athysanini based on both morphological and molecular datasets, which is strongly supported in present phylogenetic analyses in both BI and ML methods using the six concatenated datasets: amino acid sequences and nucleotides from different combinations of protein-coding genes (PCGs), ribosomal RNA (rRNAs), and transfer RNA (tRNAs). Phylogenetic trees reconstructed herein based on the BI and ML analyses consistently recovered monophylitic Athysanini, except Watanabella graminea (Athysanini) in Opsiini with high support values.

Mitogenomic phylogeny of nymphalid subfamilies confirms the basal clade position of Danainae (Insecta: Lepidoptera: Nymphalidae).

The phylogenetic relationships among the nymphalid subfamilies have largely been resolved using both morphological and molecular datasets, with the exception of a conflicting basal clade position for Libytheinae or Danainae that remains contentious between morphological and molecular studies. Several phylogenomic analyses have found that the danaine clade is sister to other nymphalid subfamilies; however, it largely depends on utilizing different molecular datasets, analysis methods, and taxon sampling. This study aimed to resolve the basal clade position and relationships among subfamilies and tribes of Nymphalinae by combining the most comprehensive available mitogenomic datasets with various analyses methods by incorporating a new Symbrenthia lilaea Hewitson sequence data. Phylogenetic relationships among 11 nymphalid subfamilies and the tribes of Nymphalinae were inferred by combining new and available mitogenomic sequence data from 80 ingroup and six outgroup species. The phylogenetic trees were reconstructed using maximum-likelihood (ML) and Bayesian inference (BI) methods based on five concatenated datasets: amino acid sequences and nucleotides from different combinations of protein-coding genes (PCGs), ribosomal RNA (rRNAs), and transfer RNA (tRNAs). Danainae is well-supported as the basal clade and sister to the remaining nymphalid subfamilies, except for the paraphyletic Libytheinae. Libytheinae was either recovered as a sister to the danaine clade followed by the satyrine clade or sister to the nymphaline + heliconiine clades, and is consistent with recent phylogenetic studies on Nymphalidae. The monophyletic Nymphalinae has been recovered in all analyses and resolves tribal-level relationships with high support values in both BI and ML analyses. We supported the monophyletic Nymphalini as a sister clade to Victorini, Melitaeini, and Kallimini + Junoniini with high supporting values in BI and ML analyses, which is consistent with previously published morphological and molecular studies.

Taxonomic notes on the antlion tribe Palparini Banks (Neuroptera: Myrmeleontidae) from Pakistan.

The antlion tribe Palparini Banks, 1911 (Myrmeleontidae: Ascalaphinae) currently comprises five genera and seven species in Pakistan. The taxonomic status of three genera, namely Indopalpares Insom & Carfi, 1988, Palpares Rambur, 1842, and Parapalpares Insom & Carfi, 1988, are revised herein. Indopalpares pardus (Rambur, 1842), Palpares zebratus Rambur, 1842, and Parapalpares solidus (Gerstaecker, 1894) are redescribed based on the material from the northern areas of Pakistan. The following taxonomic and nomenclatural changes are proposed: Palpares patiens is re-established as valid species, and P. infimus is transferred to senior synonym of P. patiens from P. zebratus; Palpares trichogaster syn. nov. is considered a new synonym of Palpares zebratus. The re-find of the rarely known endemic species Palpares zebratus from northern areas in Pakistan reveals its wider distribution far from its type localities in the southern Indian state (Tamil Nadu) and the southern province in Pakistan (Sindh). Taxonomic remarks, distribution maps, and detailed photographs of three species are provided based on both external morphological and genital characters.

The green lacewings of Pakistan (Neuroptera: Chrysopidae): a faunal review with new records of genera and species.

A review of the present knowledge on the taxonomy and distribution of the green lacewings (Neuroptera: Chrysopidae) from Pakistan is presented. So far, 19 species are known to occur in Pakistan including three species newly recorded, i.e., Italochrysa aequalis (Walker, 1853), Italochrysa everetti (van der Weele, 1909), and Tumeochrysa indica Needham, 1909. In addition, there are five undetermined species of Apertochrysa Tjeder, 1966 not determined in this paper. We here describe/re-describe 16 species of the 24 Pakistani green lacewing species. Two new combinations are proposed: Apertochrysa murreensis (Tjeder, 1963) comb. nov., and Apertochrysa vartianorum (Hlzel, 1973) comb. nov. The genus Tumeochrysa Needham, 1909 is recorded for the first time in Pakistan. Identification keys are provided to all known genera and species that occur in Pakistan. Additionally, for each species, taxonomic notes, diagnosis, a complete list of synonyms, and distribution maps are provided.

The first complete mitochondrial genomes of three dobsonfly species (Megaloptera: Corydalidae) from Pakistan with phylogenetic implications

ABSTRACT Megaloptera is a small holometabolous insect order that includes two genera and three species of Corydalidae in Pakistan. Here we sequenced the complete mitochondrial genomes of these three Pakistani corydalids: Nevromus intimus (McLachlan, 1869) (16,614 bp), Protohermes motuoensis Liu & Yang, 2006 (16,238 bp), and Protohermes walkeri Navás, 1929 (16,514 bp). It also represents the first set of complete mitogenomes sequenced for Neuropterida in Pakistan. The gene order was found to be similar to other published dobsonfly mitogenomes except the variable length of the non-coding region in each species. The phylogenetic analysis using 13 protein-coding genes by Maximum likelihood and Bayesian inference yielded largely consistent topologies, in which the phylogenetic positions of the three species herein studied are recovered.

Taxonomic notes on owlflies from Pakistan (Neuroptera: Myrmeleontidae: Ascalaphinae).

Taxonomic notes are presented on the former Ascalaphidae (owlflies), now subfamily Ascalaphinae of the family Myrmeleontidae from Pakistan. An updated checklist of new records is provided that accounts for all known 15 genera and 22 species from Pakistan, excluding the species of the tribe Palparini. Geographical distribution maps and an updated identification key to all known genera and species from Pakistan are also given. We synonymized two monotypic genera, Horischema Mészáros Ábrahám, 2003 and Perissoschema Mészáros Ábrahám, 2003 both as junior synonyms of Ogcogaster Westwood, 1847 based on very similar male genitalia and external morphological characters. Moreover, Perissoschema evae Mészáros Ábrahám, 2003 is treated as a junior synonym of Ogcogaster segmentator Westwood, 1847. We recorded three genera for the first time from Pakistan, i.e., Acheron Lefèbvre, 1842, Glyptobasis McLachlan, 1873, and Suphalomitus van der Weele, 1909. To more completely resolve the generic or specific status of those poorly known species from Pakistan, broader sampling throughout the country is needed.

Taxonomic notes on the antlion genus Distoleon Banks (Neuroptera: Myrmeleontidae) from Pakistan.

The species of the antlion genus Distoleon Banks, 1910 (Myrmeleontidae, Myrmeleontinae, Nemoleontini) from Pakistan are revised. Three species, Distoleon sambalpurensis Ghosh, 1984, Distoleon tappa (Walker, 1853), and Distoleon verendus (Walker, 1853), all known from northern Pakistan, are re-described. Myrmeleon vesanus Walker, 1853 syn. nov. is assigned as a junior synonym of Distoleon verendus (Walker, 1853). The female of Distoleon tappa is described for the first time. Discussions about the geographical distribution of all these species are provided in detail. A key to known species of Distoleon from Pakistan is provided.

First record of the dobsonfly genus Protohermes van der Weele, 1907 from Pakistan (Megaloptera: Corydalidae).

The dobsonfly genus Protohermes van der Weele, 1907 is recorded from Pakistan for the first time. Two species, i.e. Protohermes motuoensis Liu Yang, 2006 and Protohermes walkeri Navás, 1929 are herein re-described based on new materials from Pakistan.

Neuropterida (Insecta: Megaloptera, Raphidioptera, Neuroptera) of Pakistan: a catalogue and faunistic review.

The first comprehensive catalogue of the extant Neuropterida of Pakistan is presented, and the known distributions of all of these species from Pakistan are summarized. The fauna, as presently known, comprises 113 species in 63 genera and 11 families, but this certainly attributes to a significant under-representation of the true fauna. Eighteen species are presently known only from Pakistan and are possibly endemic. The biogeography and several related aspects of the fauna are discussed.